This is a test version of the ClinGen Allele Registry and hosts obsolete or unreal identifiers. Please visit here for the production version.
Canonical Allele Identifier: CA349038985
Gene: SCN2A HGNC NCBI
MyVariant.info:
Revel Score:

Genomic Alleles

HGVS Genome Assembly
NC_000002.12:g.165389244T>A , CM000664.2:g.165389244T>A GRCh38
NC_000002.11:g.166245754T>A , CM000664.1:g.166245754T>A GRCh37
NC_000002.10:g.165954000T>A NCBI36
NG_008143.1:g.154843T>A

Transcript Alleles

HGVS Amino-acid Change
ENST00000631182.3:c.5438T>A MANE Plus Clinical ENSP00000486885.1:p.Ile1813Lys
ENST00000375437.7:c.5438T>A MANE Select ENSP00000364586.2:p.Ile1813Lys
ENST00000636071.2:c.5438T>A ENSP00000490107.1:p.Ile1813Lys
ENST00000636135.1:c.*3757T>A ENSP00000489821.1:n.*3757T>A
ENST00000636384.2:c.*3425T>A ENSP00000490765.1:n.*3425T>A
ENST00000636662.2:c.*5961T>A ENSP00000489873.1:n.*5961T>A
ENST00000636769.1:c.*3380T>A ENSP00000490800.1:n.*3380T>A
ENST00000636985.2:c.5042T>A ENSP00000490849.1:p.Ile1681Lys
ENST00000637266.2:c.5438T>A ENSP00000490866.1:p.Ile1813Lys
ENST00000283256.10:c.5438T>A ENSP00000283256.6:p.Ile1813Lys
ENST00000375427.4:c.5438T>A ENSP00000364576.2:p.Ile1813Lys
ENST00000375437.6:c.5438T>A ENSP00000364586.2:p.Ile1813Lys
ENST00000480032.4:n.8869T>A
ENST00000631182.2:c.5438T>A ENSP00000486885.1:p.Ile1813Lys
NM_001040142.1:c.5438T>A NP_001035232.1:p.Ile1813Lys
NM_001040143.1:c.5438T>A NP_001035233.1:p.Ile1813Lys
NM_021007.2:c.5438T>A NP_066287.2:p.Ile1813Lys
XM_005246750.2:c.5438T>A XP_005246807.1:p.Ile1813Lys
XM_005246753.2:c.5438T>A XP_005246810.1:p.Ile1813Lys
XM_005246754.3:c.5408T>A XP_005246811.1:p.Ile1803Lys
XM_005246755.3:c.4685T>A XP_005246812.1:p.Ile1562Lys
XM_011511608.1:c.5438T>A XP_011509910.1:p.Ile1813Lys
XM_011511609.1:c.5438T>A XP_011509911.1:p.Ile1813Lys
XM_005246753.3:c.5438T>A XP_005246810.1:p.Ile1813Lys
XM_017004656.1:c.5438T>A XP_016860145.1:p.Ile1813Lys
XM_017004657.1:c.5438T>A XP_016860146.1:p.Ile1813Lys
XM_017004658.1:c.4685T>A XP_016860147.1:p.Ile1562Lys
XM_017004659.1:c.3236T>A XP_016860148.1:p.Ile1079Lys
XM_024453037.1:c.4685T>A XP_024308805.1:p.Ile1562Lys
NM_001040142.2:c.5438T>A MANE Select NP_001035232.1:p.Ile1813Lys
NM_001040143.2:c.5438T>A NP_001035233.1:p.Ile1813Lys
NM_001371246.1:c.5438T>A MANE Plus Clinical NP_001358175.1:p.Ile1813Lys
NM_001371247.1:c.5438T>A NP_001358176.1:p.Ile1813Lys
NM_021007.3:c.5438T>A NP_066287.2:p.Ile1813Lys